Plastome sequences help to improve the systematic position of trinerved species in the family Lauraceae.

Plastome sequences help to improve the systematic position of trinerved species in the family Lauraceae.

Tian, Xiangyu;Ye, Junwei;Song, Yu;
PeerJ 2019 Vol. 7 pp. e7662
175
tian2019plastomepeerj

Abstract

is a genus (c. 100 spp.) of trees belonging to the "core Laureae" group in the family Lauraceae. It is often confused with , and the systematics of the genus is unclear. Here, total 10 complete plastomes from nine trinerved species and another species (sect. Meissn.) were sequenced. Nine highly variable regions, -GUG/, /-GUC, /, , -UAG/, and , were identified among the 10 species. In addition, a total of 1,836 mutation events including six micro-inversions, 156 indels, and 1,674 substitutions, were also summarized. Comparing our sequences with other available plastomes in the "core Laureae," we put forward that six hypervariable loci, -GUG/, , /, UAG, , and , could potentially be used as plastid barcode candidates for species identification. Further phylogenetic analyses were conducted using 49 complete Lauraceae plastomes. The results supported a close relationship among trinerved species and suggested an improved trinerved group comprising species of trinerved species and .

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76512
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