Among the composite manufacturing methods, injection molding has higher time efficiency and improved processability. The production of composites via injection molding requires a pre-process to mix and pelletize the matrix polymer and reinforcement material. Herein, we studied the effect of extrusion process conditions for making pellets on the mechanical and thermal properties provided by injection molding. Polyamide 6 (PA6) was used as the base, and composites were produced by blending carbon fibers and AlO as the filler. To determine the optimum blending ratio, the mechanical properties, thermal conductivity, and melt flow index (MI) were measured at various blending ratios. With this optimum blending ratio, pellets were produced by changing the temperature and RPM conditions, which are major process variables during compounding. Samples were fabricated by applying the same injection conditions, and the mechanical strength, MI values, and thermal properties were measured. The mechanical strength increased slightly as the temperature and RPM increased, and the MI and thermal conductivity also increased. The results of this study can be used as a basis for specifying the conditions of the mixing and compounding process such that the desired mechanical and thermal properties are obtained.