Traditional technologies of producing epoxy based polymer composite materials (PCM) require a long-term and energy consuming thermal processing. Microwave heating could be used as an alternative technology for heating work pieces made of PCM; this would allow to reduce treatment time and energy consumption significantly. A mathematical model of temperature distribution inside a cylindrical composite system during microwave treatment was investigated in this paper. The model includes a hollow PCM cylinder made of an epoxy binder and carbon fibers and a solid cylindrical mandrel. Theoretical and experimental results on the temperature state of the system were analyzed and discussed.