Results of flood modelling for three cities located in different parts of Russia: (1) Veliky Ustyug at the Northern Dvina river (Europe); (2) Mezhdurechensk at the Tom river (Siberia); and (3) Blagoveschensk at the Amur river (Far East) are presented. The two-dimensional hydrodynamic model of flow in channels and on floodplain STREAM_2D on the basis of the numerical solution of two-dimensional Saint–Venant equations on a hybrid curvilinear quadrangular and rectangular mesh was used for the simulations. Verification of the model through a comparison of simulated inundated areas with outlines of flooded zones from satellite images for known hydrologic situations demonstrate close correspondence (relative errors of 7–12% in terms of the area for peaks of the analysed floods). Analyses of embankment influence of large-scale levees on the water flow demonstrate that, in some cases, water levels could rise by more than 1 m and the patterns of the flooding zones could significantly differ.