Two Energy Dispersive X-ray Fluorescence equipments have been compared in order to verify its performance for clay characterization and potential application to the study in archaeometric field and industry. Two clay standard reference materials (SRM), IPT-42 and IPT-51 and one IAEA intercomparison sample were analyzed by two different methodologies and equipments. Asentamiento Universitario Zapala laboratory has a Shimadzu EDX-800HS bench top equipment and 13 elements from S to Zr were quantified in the standards. Applied Nuclear Physics Laboratory has a portable EDXRF system. It was possible to quantify K, Ti and Fe and qualitatively to identify Mn, Rb, Zn and Zr.