Research Article

Engineered Pseudomonas putida for Enhanced Biodegradation of Per- and Polyfluoroalkyl Substances (PFAS) in Contaminated Groundwater Using a Novel Bioreactor Design

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J Ong Appl Biochem Sci, 2026, 1 (1), 56-62, doi: , ISSN

Abstract

Per- and polyfluoroalkyl substances (PFAS) represent a pervasive class of anthropogenic pollutants characterized by remarkable chemical stability, high environmental persistence, and significant biological toxicity. Conventional remediation strategies, including carbon adsorption and high-temperature incineration, remain energy-intensive and often generate hazardous secondary waste streams. In this study, we developed an engineered strain of Pseudomonas putida KT2440 designated strain Def-09, harboring a rationally engineered fluoroacetate dehalogenase variant (FAcD-M4) and a customized multi-component alkane monooxygenase system (AlkB/RubA/RubB) targeted to the periplasmic space. Strain Def-09 demonstrated robust tolerance to high concentrations of perfluorooctanoic acid (PFOA) and perfluorooctane sulfonate (PFOS) up to 250 mg/L. To translate this biocatalytic capability to realistic water treatment applications, we designed an aerobic, continuous-flow dynamic fluidized-bed bioreactor utilizing macroporous aminated carbon-silica composite carrier beads for stable bacterial immobilization. Under continuous operating conditions with an optimized hydraulic retention time of 18 hours, the system achieved a steady-state defluorination rate of 68.4 ± 3.1% for PFOA and 52.8 ± 2.6% for PFOS from synthetic and genuine groundwater matrices containing 100 μg/L baseline contaminants. High-resolution LC-MS/MS and 19F NMR analyses confirmed progressive defluorination through sequential chain-shortening and terminal decarboxylation/desulfonation intermediates without toxic byproduct accumulation. These findings establish a viable, scalable bioengineering framework for the sustainable in situ and ex situ destruction of recalcitrant fluorinated pollutants.

Keywords synthetic biology pseudomonas putida Defluorination PFAS biodegradation Fluidized-bed bioreactor
Authors 3

The team behind this paper

3 authors, 3 institutions.

This paper Ghent University — Belgium Ghent University 1 author Tokyo Institute of Technology — Japan Tokyo Institute of Tech… 1 author University of Ibadan — Nigeria University of Ibadan 1 author Prof. Elena Rostova — corresponding author ER Prof. Elena Rostova ✉ Dr. Kenjiro Takahashi KT Dr. Kenjiro Takahashi Prof. Amara Nwachukwu AN Prof. Amara Nwachukwu

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September 2026

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Bibliographic Information

Prof. Elena Rostova, Dr. Kenjiro Takahashi, Prof. Amara Nwachukwu, (2026). Engineered Pseudomonas putida for Enhanced Biodegradation of Per- and Polyfluoroalkyl Substances (PFAS) in Contaminated Groundwater Using a Novel Bioreactor Design, Journal of Ongoing Applied Biochemical Sciences, 1(1): 56-62
Bibtex Citation
@article{prof._elena_rostova2026joabs,
author = {Prof. Elena Rostova and Dr. Kenjiro Takahashi and Prof. Amara Nwachukwu},
title = {Engineered Pseudomonas putida for Enhanced Biodegradation of Per- and Polyfluoroalkyl Substances (PFAS) in Contaminated Groundwater Using a Novel Bioreactor Design},
journal = {Journal of Ongoing Applied Biochemical Sciences},
year = {2026},
volume = {1},
number = {1},
pages = {56-62},
doi = {},
url = {https://scimatic.org/show_manuscript/9832}
}
APA Citation
Rostova, P.E., Takahashi, D.K., Nwachukwu, P.A., (2026). Engineered Pseudomonas putida for Enhanced Biodegradation of Per- and Polyfluoroalkyl Substances (PFAS) in Contaminated Groundwater Using a Novel Bioreactor Design. Journal of Ongoing Applied Biochemical Sciences, 1(1), 56-62. https://doi.org/

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