GENCODE: producing a reference annotation for ENCODE
Abstract
In total, 487 loci, of which 434 are coding, have been annotated as part of the GENCODE reference set available from the UCSC browser. Comparison of GENCODE annotation with RefSeq and ENSEMBL show only 40% of GENCODE exons are contained within the two sets, which is a reflection of the high number o …
Keywords
National Center for Biotechnology Information
NCBI
NLM
MEDLINE
RNA
humans
pubmed abstract
nih
national institutes of health
national library of medicine
research support
non-u.s. gov't
N.I.H.
Extramural
DNA
Genes
Sequence Analysis
genome
Evaluation Study
Expressed Sequence Tags
chromosome mapping
proteins / genetics*
reference standards
messenger / analysis
human*
genomics / methods
computational biology / methods
pseudogenes
pmid:16925838
pmc1810553
doi:10.1186/gb-2006-7-s1-s4
jennifer harrow
france denoeud
roderic guigo
computational biology / standards*
genomics / standards*
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269322
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