1 De Novo Molecular Formula Annotation and Structure Elucidation Using SIRIUS 4.

2 Annotation of Specialized Metabolites from High-Throughput and High-Resolution Mass Spectrometry Metabolomics.

3 Insight into the Functional Diversification of Lipases in the Endoparasitoid (Hymenoptera: Pteromalidae) by Genome-scale Annotation and Expression Analysis.

4 Whole-Genome Sequences of Three Symbiotic Endozoicomonas Strains

5 PyCellBase, an efficient python package for easy retrieval of biological data from heterogeneous sources.

6 A late-binding, distributed, NoSQL warehouse for integrating patient data from clinical trials.

7 challenges in characterizing the uncharacterized

8 evaluation of web-based annotation of ophthalmic images for multicentric clinical trials

9 genome sequence of the freshwater yangtze finless porpoise

10 Preliminary analysis and annotation of the partial genome sequence of Francisella tularensis strain Schu 4

11 Dependency Annotation of Ottoman Turkish with Multilingual BERT

12 Combining learning and constraints for genome-wide protein annotation.

13 A Flexible Object-of-Interest Annotation Framework for Online Video Portals

14 Integrating genome-wide association study and methylation functional annotation data identified candidate genes and pathways for schizophrenia.

15 Variant Call Format (VCF)-Diagnostic Annotation and Reporting Tool (VCF-DART) A Customizable Analysis Pipeline for Identification of Clinically Relevant Genetic Variants in Next-Generation Sequencing Data.

16 Functional annotation of the human retinal pigment epithelium transcriptome

17 MIT GEOblog: A platform for digital annotation of space for collective community based digital story telling

18 Annotation of enhanced radiographs for medical image retrieval with deep convolutional neural networks.

19 BreakingNews: Article Annotation by Image and Text Processing.

20 A three-dimensional quantification of calcified and non-calcified plaques in coronary arteries based on computed tomography coronary angiography images: Comparison with expert's annotations and virtual histology intravascular ultrasound.

21 Systematic discovery of conservation states for single-nucleotide annotation of the human genome

22 Harmonizing semantic annotations for computational models in biology.

23 Model annotation and discovery with the Physiome Model Repository.

24 A multi-source domain annotation pipeline for quantitative metagenomic and metatranscriptomic functional profiling.

25 Machine learning for discovering missing or wrong protein function annotations : A comparison using updated benchmark datasets.

26 R-MetaboList 2: A Flexible Tool for Metabolite Annotation from High-Resolution Data-Independent Acquisition Mass Spectrometry Analysis.

27 gFACs: Gene Filtering, Analysis, and Conversion to Unify Genome Annotations Across Alignment and Gene Prediction Frameworks.

28 Annotation and Visualization in Android: An Application for Education and Real Time Information

29 Multi-word expressions annotations effect in document classification task

30 Functional annotation of de novo variants from healthy individuals.

31 LATTE: Accelerating LiDAR Point Cloud Annotation via Sensor Fusion, One-Click Annotation, and Tracking

32 Designing Videogames to Crowdsource Accelerometer Data Annotation for Activity Recognition Research.

33 Legal documents from the Judean Desert: The impact of the Shari'a on Bedouin customary law: The texts in Arabic English translation and annotation glossary of Islamic and tribal customary legal terms and maxims

34 STAT: A Web-based Semantic Text Annotation Tool to Assist Building Mental Health Knowledge Base.

35 Cross-lingual Semantic Annotation of Biomedical Literature: Experiments in Spanish and English.

36 Reflective Annotations: On Becoming a Scholar

37 Efficient Queries of Stand-off Annotations for Natural Language Processing on Electronic Medical Records

38 High quality 3C de novo assembly and annotation of a multidrug resistant ST-111 Pseudomonas aeruginosa genome: Benchmark of hybrid and non-hybrid assemblers.

39 Historical chemical annotations of Cinchona bark collections are comparable to results from current day high-pressure liquid chromatography technologies

40 Re-annotation of 191 developmental and epileptic encephalopathy-associated genes unmasks de novo variants in .

41 A collaborative approach for semantic time-based video annotation using gamification

42 Gene discovery and annotation using LCM-454 transcriptome sequencing

43 Gene discovery and annotation using LCM-454 transcriptome sequencing

44 KOBAS 2.0: a web server for annotation and identification of enriched pathways and diseases

45 Transcriptome sequencing in an ecologically important tree species: assembly, annotation, and marker discovery

46 LesionMap: A Method and Tool for the Semantic Annotation of Dermatological Lesions for Documentation and Machine Learning

47 Transcriptome sequencing in an ecologically important tree species: assembly, annotation, and marker discovery

48 WEGO: a web tool for plotting GO annotations

49 WEGO: a web tool for plotting GO annotations

50 Transcriptome sequencing in an ecologically important tree species: assembly, annotation, and marker discovery

51 Gene discovery and annotation using LCM-454 transcriptome sequencing

52 Eras: Improving the quality control in the annotation process for Natural Language Processing tasks

53 Automated genome sequence analysis and annotation.

54 A novel method for automatic functional annotation of proteins.

55 Tool for rapid annotation of microbial SNPs (TRAMS): a simple program for rapid annotation of genomic variation in prokaryotes

56 WEGO: a web tool for plotting GO annotations

57 annotation bibliography for geographical science field

58 electroanatomic mapping of atrial tachycardia—manual vs automated annotation

59 abc-gwas: functional annotation of estrogen receptor-positive breast cancer genetic variants

60 triannot: a versatile and high performance pipeline for the automated annotation of plant genomes

61 bridging the gap: enriching youtube videos with jazz music annotations

62 dry and wet approaches for genome-wide functional annotation of conventional and unconventional transcriptional activators

63 automatic function annotations for hoare logic

64 DATMA: Distributed AuTomatic Metagenomic Assembly and annotation framework.

65 automatic image annotation menggunakan metode block truncation dan k-nearest neighbor

66 genome assembly and annotation of the medicinal plant calotropis gigantea, a producer of anticancer and antimalarial cardenolides

67 semantic file annotation and retrieval on mobile devices

68 pyrosequencing and functional annotation analysis of microbial community in fresh water lake in saudi arabia

69 annotation-based learner’s personality modeling in distance learning context

70 multivendor spectral-domain optical coherence tomography dataset, observer annotation performance evaluation, and standardized evaluation framework for intraretinal cystoid fluid segmentation

71 BAAS: Bayesian Tracking and Fusion Assisted Object Annotation of Radar Sensor Data for Artificial Intelligence Application

72 Gene inactivation and its implications for annotation in the era of personal genomics

73 GENCODE: producing a reference annotation for ENCODE

74 De novo assembly and annotation of three Leptosphaeria genomes using Oxford Nanopore MinION sequencing

75 Towards Automated Annotation of Benthic Survey Images: Variability of Human Experts and Operational Modes of Automation

76 The Institute for Genomic Research Osa1 Rice Genome Annotation Database

77 Analysis of Antisense Expression by Whole Genome Tiling Microarrays and siRNAs Suggests Mis-Annotation of Arabidopsis Orphan Protein-Coding Genes

78 TADA-a machine learning tool for functional annotation-based prioritisation of pathogenic CNVs.

79 Annotation of Potential Vaccine Targets and Designing of mRNA-Based Multi-Epitope Vaccine against Lumpy Skin Disease Virus via Reverse Vaccinology and Agent-Based Modeling

80 SNMFCA: Supervised NMF-Based Image Classification and Annotation

81 A discriminative and sparse topic model for image classification and annotation

82 Uncertainty-aware single-cell annotation with a hierarchical reject option.

83 scCancer2: data-driven in-depth annotations of the tumor microenvironment at single-level resolution.

84 RepeatsDB in 2025: expanding annotations of structured tandem repeats proteins on AlphaFoldDB.

85 Collaborative Human-AI Risk Annotation: Co-Annotating Online Incivility with CHAIRA

86 Gene inactivation and its implications for annotation in the era of personal genomics

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