Genome-wide identification and characterization of gene family related to negative regulation of starch accumulation in storage root of .

Genome-wide identification and characterization of gene family related to negative regulation of starch accumulation in storage root of .

Pan, Ranran;Wang, Yajie;An, Feifei;Yao, Yuan;Xue, Jingjing;Zhu, Wenli;Luo, Xiuqin;Lai, Hanggui;Chen, Songbi;
Frontiers in plant science 2023 Vol. 14 pp. 1184903
62
pan2023genomewidefrontiers

Abstract

The 14-3-3 protein family is a highly conservative member of the acid protein family and plays an important role in regulating a series of important biological activities and various signal transduction pathways. The role of 14-3-3 proteins in regulating starch accumulation still remains largely unknown. To investigate the properties of 14-3-3 proteins, the structures and functions involved in starch accumulation in storage roots were analyzed, and consequently, 16 genes were identified. Phylogenetic analysis revealed that Me14-3-3 family proteins are split into two groups (ε and non-ε). All Me14-3-3 proteins contain nine antiparallel α-helices. Me14-3-3s-GFP fusion protein was targeted exclusively to the nuclei and cytoplasm. In the early stage of starch accumulation in the storage root, genes were highly expressed in high-starch cultivars, while in the late stage of starch accumulation, genes were highly expressed in low-starch cultivars. , , , and had relatively high expression levels in the storage roots. The transgenic evidence from overexpression in and the virus-induced gene silencing (VIGS) in cassava leaves and storage roots suggest that is involved in the negative regulation of starch accumulation. This study provides a new insight to understand the molecular mechanisms of starch accumulation linked with genes during cassava storage root development.

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