perspectives and insights into the competition for aminoacyl-trnas between the translational machinery and for trna dependent non-ribosomal peptide bond formation

perspectives and insights into the competition for aminoacyl-trnas between the translational machinery and for trna dependent non-ribosomal peptide bond formation

;Angela W. S. Fung;Roshani Payoe;Richard P. Fahlman
The Science of the total environment 2015 Vol. 6 pp. 2-
171
fung2015lifeperspectives

Abstract

Aminoacyl-tRNA protein transferases catalyze the transfer of amino acids from aminoacyl-tRNAs to polypeptide substrates. Different forms of these enzymes are found in the different kingdoms of life and have been identified to be central to a wide variety of cellular processes. L/F-transferase is the sole member of this class of enzyme found in Escherichia coli and catalyzes the transfer of leucine to the N-termini of proteins which result in the targeted degradation of the modified protein. Recent investigations on the tRNA specificity of L/F-transferase have revealed the unique recognition nucleotides for a preferred Leu-tRNALeu isoacceptor substrate. In addition to discussing this tRNA selectivity by L/F-transferase, we present and discuss a hypothesis and its implications regarding the apparent competition for this aminoacyl-tRNA between L/F-transferase and the translational machinery. Our discussion reveals a hypothetical involvement of the bacterial stringent response that occurs upon amino acid limitation as a potential cellular event that may reduce this competition and provide the opportunity for L/F-transferase to readily increase its access to the pool of aminoacylated tRNA substrates.

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