Comparing de novo assemblers for 454 transcriptome data

Comparing de novo assemblers for 454 transcriptome data

Sujai Kumar, Mark L Blaxter;Sujai Kumar;Mark L Blaxter;
BMC genomics 2010 Vol. 11 pp. 571-
116
blaxter2010bmccomparing

Abstract

Roche 454 pyrosequencing has become a method of choice for generating transcriptome data from non-model organisms. Once the tens to hundreds of thousands of short (250-450 base) reads have been produced, it is important to correctly assemble these to ...

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