Research Article

Application of Machine Learning Algorithms for Predicting Reaction Outcomes in Palladium-Catalyzed Cross-Coupling Reactions

33 reads
J Ong Chem Res, 2026, 6 (2), 84-89, doi: , ISSN 2651-4338

Abstract

Palladium-catalyzed cross-coupling reactions represent a cornerstone of modern synthetic organic chemistry, yet optimizing reaction parameters remains a time-consuming and resource-intensive process. In this study, we evaluate the application of machine learning (ML) algorithms—specifically Random Forest, Extreme Gradient Boosting (XGBoost), and Multilayer Perceptron (MLP)—for predicting reaction yields and outcomes in Suzuki-Miyaura and Buchwald-Hartwig cross-coupling reactions. Using a curated dataset of 2,480 reaction outcomes combined with structural, electronic, and steric descriptors calculated from RDKit and Density Functional Theory (DFT), predictive models were trained and validated. Among the evaluated models, the XGBoost algorithm demonstrated superior predictive performance, achieving a coefficient of determination (R²) of 0.89 and a mean absolute error (MAE) of 6.3% on an independent test set. Feature importance analysis utilizing SHapley Additive exPlanations (SHAP) highlighted ligand steric bulk, phosphine HOMO energy levels, and solvent dielectric constants as the key parameters driving yield variance. Furthermore, the model accurately predicted high-yielding conditions for challenging, sterically hindered substrate pairs. This chemoinformatics framework provides an accessible, data-driven approach to assist synthetic chemists in rationalizing condition selection and minimizing empirical trial-and-error optimization.

Keywords Machine learning cross-coupling reactions chemoinformatics Palladium catalysis Reaction outcome prediction
Authors 2

The team behind this paper

2 authors, 2 institutions.

This paper Department of Chemical and Materials Engineering — Mexico Department of Chemical … 1 author Indian Institute of Science — India Indian Institute of Sci… 1 author Prof. Alejandro Silva-Mendoza — corresponding author AS Prof. Alejandro Silva-Men… ✉ Dr. Sunita Deshmukh SD Dr. Sunita Deshmukh

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33 reads over 2 months.

July 2026 August 2026

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Bibliographic Information

Prof. Alejandro Silva-Mendoza, Dr. Sunita Deshmukh, (2026). Application of Machine Learning Algorithms for Predicting Reaction Outcomes in Palladium-Catalyzed Cross-Coupling Reactions, Journal of Ongoing Chemical Research, 6(2): 84-89
Bibtex Citation
@article{prof._alejandro_silva-mendoza2026jocr,
author = {Prof. Alejandro Silva-Mendoza and Dr. Sunita Deshmukh},
title = {Application of Machine Learning Algorithms for Predicting Reaction Outcomes in Palladium-Catalyzed Cross-Coupling Reactions},
journal = {Journal of Ongoing Chemical Research},
year = {2026},
volume = {6},
number = {2},
pages = {84-89},
doi = {},
url = {https://scimatic.org/index.php/show_manuscript/8603}
}
APA Citation
Silva-Mendoza, P.A., Deshmukh, D.S., (2026). Application of Machine Learning Algorithms for Predicting Reaction Outcomes in Palladium-Catalyzed Cross-Coupling Reactions. Journal of Ongoing Chemical Research, 6(2), 84-89. https://doi.org/

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